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Chaste
Build::
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- g -
- Generate()
: VoronoiGenerator< DIM >
- GenerateCylinder()
: MappableGridGenerator
- GenerateFromPart()
: RegularGrid< DIM >
- GenerateHemisphere()
: MappableGridGenerator
- GeneratePlane()
: MappableGridGenerator
- GenerateSubSegments()
: GreensFunctionSolver< DIM >
- GenerateTissuePoints()
: GreensFunctionSolver< DIM >
- GeometryWriter()
: GeometryWriter
- Get1dGridIndex()
: RegularGrid< DIM >
- GetAsVtkUnstructuredGrid()
: DiscreteContinuumMesh< ELEMENT_DIM, SPACE_DIM >
- GetAverageInterSegmentDistance()
: VesselNetworkGeometryCalculator< DIM >
- GetAverageVesselLength()
: VesselNetworkGeometryCalculator< DIM >
- GetBibliographicInformation()
: BaseParameterInstance
- GetBoundingBox()
: Facet< DIM >
, Part< DIM >
, Polygon< DIM >
- GetCentroid()
: Facet< DIM >
, Polygon< DIM >
- GetClosestEndNodeDistance()
: Vessel< DIM >
- GetComparisonId()
: VesselNode< DIM >
- GetConcentrations()
: AbstractDiscreteContinuumSolver< DIM >
, AbstractRegularGridDiscreteContinuumSolver< DIM >
, AbstractUnstructuredGridDiscreteContinuumSolver< DIM >
- GetConcentrationsAtCentroids()
: AbstractUnstructuredGridDiscreteContinuumSolver< DIM >
- GetConnectedVessels()
: Vessel< DIM >
- GetConnectivity()
: DiscreteContinuumMesh< ELEMENT_DIM, SPACE_DIM >
- GetConstantInUMeshValues()
: CellBasedDiscreteSource< DIM >
, CellStateDependentDiscreteSource< DIM >
, DiscreteSource< DIM >
, SolutionDependentDiscreteSource< DIM >
, VesselBasedDiscreteSource< DIM >
- GetConstantInURegularGridValues()
: CellBasedDiscreteSource< DIM >
, CellStateDependentDiscreteSource< DIM >
, DiscreteSource< DIM >
, SolutionDependentDiscreteSource< DIM >
, VesselBasedDiscreteSource< DIM >
- GetContainingGridIndices()
: Part< DIM >
- GetCriticalQuiescentDuration()
: Owen2011OxygenBasedCellCycleModel
- GetCurrentQuiescenceOnsetTime()
: Owen2011OxygenBasedCellCycleModel
- GetCurrentQuiescentDuration()
: Owen2011OxygenBasedCellCycleModel
- GetDiffusionParameter()
: Owen11CaUpdateRule< DIM >
- GetDirections()
: AbstractMigrationRule< DIM >
, OffLatticeMigrationRule< DIM >
- GetDirectionsForSprouts()
: OffLatticeMigrationRule< DIM >
- GetDiscreteContinuumSolvers()
: MicrovesselSolver< DIM >
- GetDiscreteSources()
: AbstractDiscreteContinuumLinearEllipticPde< ELEMENT_DIM, SPACE_DIM >
, AbstractDiscreteContinuumNonLinearEllipticPde< ELEMENT_DIM, SPACE_DIM >
- GetDistance()
: DimensionalChastePoint< DIM >
, Facet< DIM >
, Polygon< DIM >
, Vessel< DIM >
, VesselNode< DIM >
, VesselSegment< DIM >
- GetDistanceToEdges()
: Polygon< DIM >
- GetDistanceToNearestNode()
: VesselNetwork< DIM >
- GetElementCellMap()
: DiscreteContinuumMesh< ELEMENT_DIM, SPACE_DIM >
- GetElementCentroids()
: DiscreteContinuumMesh< ELEMENT_DIM, SPACE_DIM >
- GetElementRegionMarkers()
: DiscreteContinuumMesh< ELEMENT_DIM, SPACE_DIM >
- GetElementSegmentMap()
: DiscreteContinuumMesh< ELEMENT_DIM, SPACE_DIM >
- GetEndNode()
: Vessel< DIM >
- GetEnterQuiescenceOxygenConcentration()
: Owen2011OxygenBasedCellCycleModel
- GetExtents()
: RegularGrid< DIM >
, VesselNetwork< DIM >
- GetFacet()
: Part< DIM >
- GetFacets()
: Part< DIM >
- GetFlowProperties()
: Vessel< DIM >
, VesselNode< DIM >
, VesselSegment< DIM >
- GetFlowRate()
: SegmentFlowProperties< DIM >
, VesselFlowProperties< DIM >
- GetFlowSolver()
: StructuralAdaptationSolver< DIM >
- GetG2Duration()
: Owen2011OxygenBasedCellCycleModel
- GetGrid()
: AbstractRegularGridDiscreteContinuumSolver< DIM >
- GetGrowthStimulus()
: SegmentFlowProperties< DIM >
, VesselFlowProperties< DIM >
- GetHaematocrit()
: SegmentFlowProperties< DIM >
, VesselFlowProperties< DIM >
- GetHoleMarkers()
: Part< DIM >
- GetHoles()
: VesselSurfaceGenerator< DIM >
- GetId()
: AbstractVesselNetworkComponent< DIM >
- GetImage()
: ImageReader
- GetImpedance()
: SegmentFlowProperties< DIM >
, VesselFlowProperties< DIM >
- GetIndex()
: DimensionalChastePoint< DIM >
- GetIndices()
: AbstractMigrationRule< DIM >
, CellPopulationMigrationRule< DIM >
, LatticeBasedMigrationRule< DIM >
, Owen2011MigrationRule< DIM >
- GetInterCapillaryDistances()
: VesselNetworkGeometryCalculator< DIM >
- GetKm()
: MetabolicStimulusCalculator< DIM >
- GetLabel()
: AbstractDiscreteContinuumSolver< DIM >
, Facet< DIM >
- GetLeaveQuiescenceOxygenConcentration()
: Owen2011OxygenBasedCellCycleModel
- GetLength()
: Vessel< DIM >
, VesselSegment< DIM >
- GetLinearInUMeshValues()
: CellBasedDiscreteSource< DIM >
, CellStateDependentDiscreteSource< DIM >
, DiscreteSource< DIM >
, SolutionDependentDiscreteSource< DIM >
, VesselBasedDiscreteSource< DIM >
- GetLinearInURegularGridValues()
: CellBasedDiscreteSource< DIM >
, CellStateDependentDiscreteSource< DIM >
, DiscreteSource< DIM >
, SolutionDependentDiscreteSource< DIM >
, VesselBasedDiscreteSource< DIM >
- GetLocation()
: DimensionalChastePoint< DIM >
, RegularGrid< DIM >
- GetLocationOf1dIndex()
: RegularGrid< DIM >
- GetLocations()
: RegularGrid< DIM >
- GetMaxBranchesOnNode()
: VesselNetwork< DIM >
- GetMaxStimulus()
: MetabolicStimulusCalculator< DIM >
- GetMDuration()
: Owen2011OxygenBasedCellCycleModel
- GetMesh()
: AbstractUnstructuredGridDiscreteContinuumSolver< DIM >
, DiscreteContinuumMeshGenerator< ELEMENT_DIM, SPACE_DIM >
, ImageToMesh< DIM >
, MeshReader
- GetMichaelisMentenThreshold()
: MichaelisMentenSteadyStateDiffusionReactionPde< ELEMENT_DIM, SPACE_DIM >
- GetMidPoint()
: DimensionalChastePoint< DIM >
, VesselSegment< DIM >
- GetMutationState()
: Owen2011OxygenBasedCellCycleOdeSystem
- GetName()
: BaseParameterInstance
- GetNearestGridIndex()
: RegularGrid< DIM >
- GetNearestNode()
: VesselNetwork< DIM >
- GetNearestSegment()
: VesselNetwork< DIM >
- GetNearestVessel()
: VesselNetwork< DIM >
- GetNeighbourData()
: RegularGrid< DIM >
- GetNeighbourMovementIndex()
: LatticeBasedMigrationRule< DIM >
- GetNeighbourMovementProbabilities()
: CellPopulationMigrationRule< DIM >
, LatticeBasedMigrationRule< DIM >
, Owen2011MigrationRule< DIM >
- GetNode()
: Vessel< DIM >
, VesselNetwork< DIM >
, VesselSegment< DIM >
- GetNodeAtOppositeEnd()
: Vessel< DIM >
- GetNodeIndex()
: VesselNetwork< DIM >
- GetNodeLocations()
: DiscreteContinuumMesh< ELEMENT_DIM, SPACE_DIM >
- GetNodeLocationsAsPoints()
: DiscreteContinuumMesh< ELEMENT_DIM, SPACE_DIM >
- GetNodeNodeConnectivity()
: VesselNetworkGraphCalculator< DIM >
- GetNodes()
: Vessel< DIM >
, VesselNetwork< DIM >
, VesselSegment< DIM >
- GetNodeVesselConnectivity()
: VesselNetworkGraphCalculator< DIM >
- GetNonLinearPde()
: AbstractDiscreteContinuumSolver< DIM >
- GetNorm2()
: DimensionalChastePoint< DIM >
- GetNormal()
: Facet< DIM >
, Polygon< DIM >
- GetNumberOfNodes()
: Vessel< DIM >
, VesselNetwork< DIM >
- GetNumberOfPoints()
: RegularGrid< DIM >
- GetNumberOfSegments()
: Vessel< DIM >
, VesselNode< DIM >
- GetNumberOfVesselNodes()
: VesselNetwork< DIM >
- GetNumberOfVessels()
: VesselNetwork< DIM >
- GetOccupyingVolumeFraction()
: CellPopulationMigrationRule< DIM >
- GetOppositeNode()
: VesselSegment< DIM >
- GetOrigin()
: RegularGrid< DIM >
- GetOutput()
: BoundaryExtractor
, NetworkToImage< DIM >
, SurfaceCleaner
, VesselNetworkWriter< DIM >
- GetOutputData()
: AbstractVesselNetworkComponent< DIM >
, AbstractVesselNetworkComponentProperties< DIM >
, NodeFlowProperties< DIM >
, SegmentFlowProperties< DIM >
, Vessel< DIM >
, VesselFlowProperties< DIM >
, VesselNetwork< DIM >
, VesselNode< DIM >
, VesselSegment< DIM >
- GetOutputDataKeys()
: AbstractVesselNetworkComponent< DIM >
- GetOutputDataValue()
: AbstractVesselNetworkComponent< DIM >
- GetOutputFileName()
: AbstractStructuralAdaptationSolver< DIM >
- GetOxygenConcentration()
: Owen2011OxygenBasedCellCycleOdeSystem
- GetP53()
: Owen2011OxygenBasedCellCycleModel
- GetParameter()
: ParameterCollection
- GetPde()
: AbstractDiscreteContinuumSolver< DIM >
- GetPermeability()
: AbstractVesselNetworkComponentChemicalProperties< DIM >
- GetPhi()
: Owen2011OxygenBasedCellCycleModel
- GetPlane()
: Facet< DIM >
, Polygon< DIM >
- GetPointCellMap()
: RegularGrid< DIM >
- GetPointElementMap()
: DiscreteContinuumMesh< ELEMENT_DIM, SPACE_DIM >
- GetPointNodeMap()
: RegularGrid< DIM >
- GetPointPointMap()
: RegularGrid< DIM >
- GetPointProjection()
: VesselSegment< DIM >
- GetPointSegmentMap()
: RegularGrid< DIM >
- GetPolygons()
: Facet< DIM >
, Part< DIM >
- GetPressure()
: AbstractVesselNetworkComponentFlowProperties< DIM >
- GetQRef()
: MetabolicStimulusCalculator< DIM >
- GetRadius()
: AbstractVesselNetworkComponent< DIM >
, Vessel< DIM >
- GetReferenceConcentration()
: AbstractDiscreteContinuumSolver< DIM >
- GetReferenceConcentrationScale()
: BaseUnits
- GetReferenceLengthScale()
: BaseUnits
, DimensionalChastePoint< DIM >
, DiscreteContinuumMesh< ELEMENT_DIM, SPACE_DIM >
, Part< DIM >
, RegularGrid< DIM >
, VesselNode< DIM >
- GetReferenceTimeScale()
: BaseUnits
- GetRegressionTime()
: VesselFlowProperties< DIM >
- GetRGBoundaryConditions()
: FiniteDifferenceSolver< DIM >
- GetSamplingImage()
: NetworkToSurface< DIM >
- GetSDuration()
: Owen2011OxygenBasedCellCycleModel
- GetSegment()
: Vessel< DIM >
, VesselNode< DIM >
- GetSegmentIndices()
: Part< DIM >
- GetSegments()
: Vessel< DIM >
, VesselNode< DIM >
- GetShortDescription()
: BaseParameterInstance
- GetSolution()
: AbstractDiscreteContinuumSolver< DIM >
, AbstractRegularGridDiscreteContinuumSolver< DIM >
, AbstractUnstructuredGridDiscreteContinuumSolver< DIM >
- GetSpacing()
: RegularGrid< DIM >
- GetSprouts()
: AbstractSproutingRule< DIM >
, LatticeBasedSproutingRule< DIM >
, OffLatticeSproutingRule< DIM >
, Owen2011SproutingRule< DIM >
- GetStartNode()
: Vessel< DIM >
- GetStimulus()
: ShrinkingStimulusCalculator< DIM >
- GetSurface()
: NetworkToSurface< DIM >
, VesselSurfaceGenerator< DIM >
- GetSurfacePolygons()
: VesselSurfaceGenerator< DIM >
- GetSymbol()
: BaseParameterInstance
- GetTauP()
: MechanicalStimulusCalculator< DIM >
- GetTauReference()
: MechanicalStimulusCalculator< DIM >
- GetTimeIncrement()
: AbstractStructuralAdaptationSolver< DIM >
- GetTissueTissueInteractionMatrix()
: GreensFunctionSolver< DIM >
- GetTissueVesselInteractionMatrix()
: GreensFunctionSolver< DIM >
- GetTolerance()
: AbstractStructuralAdaptationSolver< DIM >
- GetTotalLength()
: VesselNetworkGeometryCalculator< DIM >
- GetTotalSurfaceArea()
: VesselNetworkGeometryCalculator< DIM >
- GetTotalVolume()
: VesselNetworkGeometryCalculator< DIM >
- GetType()
: DiscreteContinuumBoundaryCondition< DIM >
- GetUnitTangent()
: DimensionalChastePoint< DIM >
, VesselSegment< DIM >
- GetUnitVector()
: DimensionalChastePoint< DIM >
- GetValue()
: DiscreteContinuumBoundaryCondition< DIM >
, ParameterInstance< UNIT >
- GetValueAsString()
: BaseParameterInstance
, ParameterInstance< UNIT >
- GetVEGF()
: Owen2011OxygenBasedCellCycleModel
- GetVertex()
: Polygon< DIM >
- GetVertexLocations()
: Part< DIM >
- GetVertices()
: Facet< DIM >
, Part< DIM >
, Polygon< DIM >
- GetVessel()
: VesselNetwork< DIM >
, VesselSegment< DIM >
- GetVesselEndNodes()
: VesselNetwork< DIM >
- GetVesselIndex()
: VesselNetwork< DIM >
- GetVesselLengthDistribution()
: VesselNetworkGeometryCalculator< DIM >
- GetVessels()
: VesselNetwork< DIM >
- GetVesselSegmentIndex()
: VesselNetwork< DIM >
- GetVesselSegments()
: VesselNetwork< DIM >
- GetVesselTissueInteractionMatrix()
: GreensFunctionSolver< DIM >
- GetVesselVesselInteractionMatrix()
: GreensFunctionSolver< DIM >
- GetViscosity()
: SegmentFlowProperties< DIM >
, VesselFlowProperties< DIM >
- GetVtk()
: Part< DIM >
- GetVtkGrid()
: RegularGrid< DIM >
- GetVtkPolygon()
: Polygon< DIM >
- GetVtkSolution()
: AbstractRegularGridDiscreteContinuumSolver< DIM >
, AbstractUnstructuredGridDiscreteContinuumSolver< DIM >
- GetVtkSurface()
: VesselSurfaceGenerator< DIM >
- GetVtkVertices()
: Facet< DIM >
, Polygon< DIM >
- GetWallShearStress()
: SegmentFlowProperties< DIM >
, VesselFlowProperties< DIM >
- GetWriteOutput()
: AbstractStructuralAdaptationSolver< DIM >
- GreensFunctionSolver()
: GreensFunctionSolver< DIM >