| AbstractVesselNetworkComponent() | AbstractVesselNetworkComponent< DIM > | |
| AddVessel(boost::shared_ptr< Vessel< DIM > > pVessel) | VesselNetwork< DIM > | |
| AddVessels(std::vector< boost::shared_ptr< Vessel< DIM > > > vessels) | VesselNetwork< DIM > | |
| CopySegmentFlowProperties(unsigned index=0) | VesselNetwork< DIM > | |
| CopyVessels() | VesselNetwork< DIM > | |
| CopyVessels(std::vector< boost::shared_ptr< Vessel< DIM > > > vessels) | VesselNetwork< DIM > | |
| Create() | VesselNetwork< DIM > | static |
| DivideVessel(boost::shared_ptr< Vessel< DIM > > pVessel, const DimensionalChastePoint< DIM > &rLocation) | VesselNetwork< DIM > | virtual |
| ExtendVessel(boost::shared_ptr< Vessel< DIM > > pVessel, boost::shared_ptr< VesselNode< DIM > > pEndNode, boost::shared_ptr< VesselNode< DIM > > pNewNode) | VesselNetwork< DIM > | virtual |
| FormSprout(const DimensionalChastePoint< DIM > &sproutBaseLocation, const DimensionalChastePoint< DIM > &sproutTipLocation) | VesselNetwork< DIM > | virtual |
| GetDistanceToNearestNode(const DimensionalChastePoint< DIM > &rLocation) | VesselNetwork< DIM > | |
| GetExtents(bool useRadii=false) | VesselNetwork< DIM > | |
| GetId() const | AbstractVesselNetworkComponent< DIM > | virtual |
| GetMaxBranchesOnNode() | VesselNetwork< DIM > | |
| GetNearestNode(const DimensionalChastePoint< DIM > &rLocation) | VesselNetwork< DIM > | |
| GetNearestNode(boost::shared_ptr< VesselNode< DIM > > pInputNode) | VesselNetwork< DIM > | |
| GetNearestSegment(boost::shared_ptr< VesselSegment< DIM > > pSegment) | VesselNetwork< DIM > | |
| GetNearestSegment(boost::shared_ptr< VesselNode< DIM > > pNode, bool sameVessel=true) | VesselNetwork< DIM > | |
| GetNearestSegment(const DimensionalChastePoint< DIM > &rLocation) | VesselNetwork< DIM > | |
| GetNearestVessel(const DimensionalChastePoint< DIM > &rLocation) | VesselNetwork< DIM > | |
| GetNode(unsigned index) | VesselNetwork< DIM > | |
| GetNodeIndex(boost::shared_ptr< VesselNode< DIM > > pNode) | VesselNetwork< DIM > | |
| GetNodes() | VesselNetwork< DIM > | |
| GetNumberOfNodes() | VesselNetwork< DIM > | |
| GetNumberOfVesselNodes() | VesselNetwork< DIM > | |
| GetNumberOfVessels() | VesselNetwork< DIM > | |
| GetOutputData() | VesselNetwork< DIM > | virtual |
| GetOutputDataKeys() | AbstractVesselNetworkComponent< DIM > | virtual |
| GetOutputDataValue(const std::string &rKey) | AbstractVesselNetworkComponent< DIM > | virtual |
| GetRadius() const | AbstractVesselNetworkComponent< DIM > | virtual |
| GetVessel(unsigned index) | VesselNetwork< DIM > | |
| GetVesselEndNodes() | VesselNetwork< DIM > | |
| GetVesselIndex(boost::shared_ptr< Vessel< DIM > > pVessel) | VesselNetwork< DIM > | |
| GetVessels() | VesselNetwork< DIM > | |
| GetVesselSegmentIndex(boost::shared_ptr< VesselSegment< DIM > > pVesselSegment) | VesselNetwork< DIM > | |
| GetVesselSegments() | VesselNetwork< DIM > | |
| MergeCoincidentNodes(double tolerance=0.0) | VesselNetwork< DIM > | |
| MergeCoincidentNodes(std::vector< boost::shared_ptr< Vessel< DIM > > > pVessels, double tolerance=0.0) | VesselNetwork< DIM > | |
| MergeCoincidentNodes(std::vector< boost::shared_ptr< VesselNode< DIM > > > nodes, double tolerance=0.0) | VesselNetwork< DIM > | |
| MergeShortVessels(units::quantity< unit::length > cutoff=10.0 *1.e-6 *unit::metres) | VesselNetwork< DIM > | |
| mId | AbstractVesselNetworkComponent< DIM > | protected |
| mNodes | VesselNetwork< DIM > | private |
| mNodesUpToDate | VesselNetwork< DIM > | private |
| mOutputData | AbstractVesselNetworkComponent< DIM > | protected |
| mRadius | AbstractVesselNetworkComponent< DIM > | protected |
| mSegments | VesselNetwork< DIM > | private |
| mSegmentsUpToDate | VesselNetwork< DIM > | private |
| mVesselNodes | VesselNetwork< DIM > | private |
| mVesselNodesUpToDate | VesselNetwork< DIM > | private |
| mVessels | VesselNetwork< DIM > | private |
| NodeIsInNetwork(boost::shared_ptr< VesselNode< DIM > > pSourceNode) | VesselNetwork< DIM > | |
| NumberOfNodesNearLocation(const DimensionalChastePoint< DIM > &rLocation, double tolerance=0.0) | VesselNetwork< DIM > | |
| RemoveShortVessels(units::quantity< unit::length > cutoff=10.0 *1.e-6 *unit::metres, bool endsOnly=true) | VesselNetwork< DIM > | |
| RemoveVessel(boost::shared_ptr< Vessel< DIM > > pVessel, bool deleteVessel=false) | VesselNetwork< DIM > | |
| SetId(unsigned id) | AbstractVesselNetworkComponent< DIM > | virtual |
| SetNodeRadii(units::quantity< unit::length > radius) | VesselNetwork< DIM > | |
| SetNodeRadiiFromSegments() | VesselNetwork< DIM > | |
| SetOutputData(const std::string &rKey, double value) | AbstractVesselNetworkComponent< DIM > | virtual |
| SetRadius(units::quantity< unit::length > radius) | AbstractVesselNetworkComponent< DIM > | virtual |
| SetSegmentProperties(boost::shared_ptr< VesselSegment< DIM > > prototype) | VesselNetwork< DIM > | |
| SetSegmentRadii(units::quantity< unit::length > radius) | VesselNetwork< DIM > | |
| SetSegmentViscosity(units::quantity< unit::dynamic_viscosity > viscosity) | VesselNetwork< DIM > | |
| Translate(DimensionalChastePoint< DIM > rTranslationVector) | VesselNetwork< DIM > | |
| Translate(DimensionalChastePoint< DIM > rTranslationVector, std::vector< boost::shared_ptr< Vessel< DIM > > > vessels) | VesselNetwork< DIM > | |
| UpdateAll(bool merge=false) | VesselNetwork< DIM > | |
| UpdateNodes() | VesselNetwork< DIM > | |
| UpdateSegments() | VesselNetwork< DIM > | |
| UpdateVesselIds() | VesselNetwork< DIM > | |
| UpdateVesselNodes() | VesselNetwork< DIM > | |
| VesselCrossesLineSegment(const DimensionalChastePoint< DIM > &rCoord1, const DimensionalChastePoint< DIM > &rCoord2, double tolerance=1e-6) | VesselNetwork< DIM > | |
| VesselNetwork() | VesselNetwork< DIM > | |
| Write(const std::string &rFileName) | VesselNetwork< DIM > | |
| ~AbstractVesselNetworkComponent() | AbstractVesselNetworkComponent< DIM > | virtual |
| ~VesselNetwork() | VesselNetwork< DIM > | virtual |